Petri Net Pathways
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Introduction
Pathways

Signaling Pathways
List of Proteins
References
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This website provides biological pathway models with discrete Petri nets as well as corresponding detailed explanation with flash animation. The aims of the modeling by Petri net are to make the biologists intuitively understand intrinsic structure and features of biological pathway, and to make it possible to mechanically model and simulate larger scale biological networks.
 
Topics
The new pathway of Apoptosis has been added to this website. (June 10, 2013)
The following 10 pathways have been included in this website. Ca-signaling; EGFR, endocytosis, GPCR, GTPase, MAPK, PKA, transcriptional reactions, and PIP. (February,19, 2013)
The pathways (IL-1,6 , PDGF , EGF) have been newly arrived! (March,19, 2007)

Past Topics
GON GON PATHWAY DATABASE CSML Matsuno Lab.
This website is constructed under the support of the Grand-in-Aid for Scientific Research (B) from Japan Society for the Promotion of Science.
Select a pathway to comprehend the pathway with Petri net.

Select a protein to show pathways including it and the links for it.

Clicking a reference brings you to the corresponding PubMed page.
FRASH   Copyright (C) 2007-2013, Biopathway Analysis Center, Faculty of Science, Yamaguchi University.